ICM Web: the interactive chromatin modeling web server

ICM Web: the interactive chromatin modeling web server

The interactive chromatin modeling web server (ICM Web) is an interactive tool that allows users to rapidly assess nucleosome stability and fold sequences of DNA into putative chromatin templates. ICM Web takes a sequence composed of As, Cs, Gs, and Ts as input and generates (i) a nucleosome energy level diagram, (ii) coarse-grained representations of free DNA and chromatin and (iii) plots of t...

Web : The Inter active Chromatin Modeling Web Server

HMMER web server: interactive sequence similarity searching

HMMER is a software suite for protein sequence similarity searches using probabilistic methods. Previously, HMMER has mainly been available only as a computationally intensive UNIX command-line tool, restricting its use. Recent advances in the software, HMMER3, have resulted in a 100-fold speed gain relative to previous versions. It is now feasible to make efficient profile hidden Markov model ...

Web Server Performance Measurement and Modeling Techniques

The popularity of the Internet, and the usage of the world wide web in particular, has grown rapidly in recent years. Thousands of companies have deployed Web servers and their usage rates have increased dramatically. Our research has focused on measuring, analyzing and evaluating the performance of Internet and Intranet Web servers with a goal of creating capacity planning models. We have crea...

A density based clustering approach to distinguish between web robot and human requests to a web server

Today world's dependence on the Internet and the emerging of Web 2.0 applications is significantly increasing the requirement of web robots crawling the sites to support services and technologies. Regardless of the advantages of robots, they may occupy the bandwidth and reduce the performance of web servers. Despite a variety of researches, there is no accurate method for classifying huge data ...